Build based on existing Docker images
The following is an example of how to update the DAFoam repo from an existing Docker image and save it as a new Docker image. First, create a file called Dockerfile, copy and paste the following commands into Dockerfile, and run docker build -t my_new_dafoam_image_name .. Here “dafoam/opt-packages:latest” can be any existing Docker image.
FROM dafoam/opt-packages:latest
# Swith to dafoamuser
USER dafoamuser
# compile
RUN . /home/dafoamuser/dafoam/loadDAFoam.sh && \
cd $DAFOAM_ROOT_PATH/repos && \
git clone https://github.com/mdolab/dafoam && \
cd dafoam && \
export export COMPILE_DAFOAM_ADF=1 && \
./Allmake
Build Docker images from scratch
If you want to compile DAFoam and its dependencies from scratch, use the following Dockerfile.
FROM ubuntu:22.04
ARG DEBIAN_FRONTEND=noninteractive
ARG TZ=UTC
# Tunable versions (match the DAFoam docs v4.0.2)
ARG PETSC_VER=3.15.5
ARG CGNS_VER=4.5.0
ARG DAFOAM_VER=4.0.2
ARG BASECLASSES_VER=1.6.1
ARG PY_SPLINE_VER=1.5.2
ARG PY_GEO_VER=1.13.0
ARG MULTIPOINT_VER=1.4.0
ARG PY_HYP_VER=2.6.1
ARG CGNS_UTILS_VER=2.6.0
ARG IDWARP_VER=2.6.2
ARG PYOPTSPARSE_VER=2.10.1
ARG PYOFM_VER=1.2.3
ARG OPENFOAM_AD_TAG=1.3.2
ARG OPENMDAO_VER=3.26
ARG MPHYS_HASH=b6db107d05937d95a46b392b6f5759677a93e46d
ARG FUNTOFEM_VER=0.3
ARG TACS_VER=3.4.0
# Build toggles
ARG MAKE_JOBS=4
ARG BUILD_ADF=false # set to true to also build ADF
ARG BUILD_IPOPT=true # set to false if providing your own IPOPT
# Use bash for RUN steps (we need `source`)
SHELL ["/bin/bash", "-lc"]
# System prerequisites (from docs)
RUN apt-get update && \
apt-get install -y --no-install-recommends \
tzdata ca-certificates apt-utils \
build-essential flex bison cmake cmake-curses-gui \
zlib1g-dev libboost-system-dev libboost-thread-dev \
libreadline-dev libncurses-dev libxt-dev freeglut3-dev \
texinfo libscotch-dev libcgal-dev gfortran swig wget git vim \
libfl-dev libibverbs-dev pkg-config liblapack-dev libmetis-dev \
libopenmpi-dev openmpi-bin && \
rm -rf /var/lib/apt/lists/*
# Create a non-root user with home
RUN useradd -m -s /bin/bash dafoamuser
USER dafoamuser
WORKDIR /home/dafoamuser
# Root folder + env script
RUN mkdir -p /home/dafoamuser/dafoam && \
echo '#!/bin/bash' > /home/dafoamuser/dafoam/loadDAFoam.sh && \
echo '# DAFoam root path' >> /home/dafoamuser/dafoam/loadDAFoam.sh && \
echo 'export DAFOAM_ROOT_PATH=$HOME/dafoam' >> /home/dafoamuser/dafoam/loadDAFoam.sh && \
chmod 755 /home/dafoamuser/dafoam/loadDAFoam.sh && \
. /home/dafoamuser/dafoam/loadDAFoam.sh && \
mkdir -p $DAFOAM_ROOT_PATH/packages $DAFOAM_ROOT_PATH/OpenFOAM \
$DAFOAM_ROOT_PATH/OpenFOAM/sharedBins $DAFOAM_ROOT_PATH/OpenFOAM/sharedLibs \
$DAFOAM_ROOT_PATH/repos
# ---------------------------
# Python (Miniconda, pinned)
# ---------------------------
RUN . /home/dafoamuser/dafoam/loadDAFoam.sh && \
cd $DAFOAM_ROOT_PATH/packages && \
wget https://repo.anaconda.com/miniconda/Miniconda3-py39_4.12.0-Linux-x86_64.sh && \
chmod 755 Miniconda3-py39_4.12.0-Linux-x86_64.sh && \
./Miniconda3-py39_4.12.0-Linux-x86_64.sh -b -p $DAFOAM_ROOT_PATH/packages/miniconda3 && \
echo '# Miniconda3' >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
echo 'export PATH=$DAFOAM_ROOT_PATH/packages/miniconda3/bin:$PATH' >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
echo 'export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$DAFOAM_ROOT_PATH/packages/miniconda3/lib' >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
echo 'export PYTHONUSERBASE=no-local-libs' >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
. $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
# Avoid conda lib/tool conflicts per docs
mv $DAFOAM_ROOT_PATH/packages/miniconda3/lib/libstdc++.so.6 $DAFOAM_ROOT_PATH/packages/miniconda3/lib/libstdc++.so.6.backup && \
mv $DAFOAM_ROOT_PATH/packages/miniconda3/lib/libtinfo.so.6 $DAFOAM_ROOT_PATH/packages/miniconda3/lib/libtinfo.so.6.backup && \
mv $DAFOAM_ROOT_PATH/packages/miniconda3/compiler_compat/ld $DAFOAM_ROOT_PATH/packages/miniconda3/compiler_compat/ld.backup && \
# Python pkgs (pin exact versions from docs)
pip install --upgrade pip && \
pip install numpy==1.23.5 scipy==1.13.1 mpi4py==3.1.5 cython==0.29.21 \
numpy-stl==2.16.0 pynastran==1.3.3 nptyping==1.4.4 tensorflow-cpu==2.12
# -------------
# PETSc + p4py
# -------------
RUN . /home/dafoamuser/dafoam/loadDAFoam.sh && \
echo '# Petsc' >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
echo "export PETSC_DIR=$DAFOAM_ROOT_PATH/packages/petsc-${PETSC_VER}" >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
echo 'export PETSC_ARCH=real-opt' >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
echo 'export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$PETSC_DIR/$PETSC_ARCH/lib' >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
echo 'export PETSC_LIB=$PETSC_DIR/$PETSC_ARCH/lib' >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
. $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
cd $DAFOAM_ROOT_PATH/packages && \
wget https://www.mcs.anl.gov/petsc/mirror/release-snapshots/petsc-${PETSC_VER}.tar.gz && \
tar -xf petsc-${PETSC_VER}.tar.gz && \
cd petsc-${PETSC_VER} && \
./configure --PETSC_ARCH=real-opt --with-scalar-type=real --with-debugging=0 \
--download-metis=yes --download-parmetis=yes --download-superlu_dist=yes \
--download-fblaslapack=yes --with-shared-libraries=yes \
--with-fortran-bindings=1 --with-cxx-dialect=C++11 && \
make PETSC_DIR=$DAFOAM_ROOT_PATH/packages/petsc-${PETSC_VER} PETSC_ARCH=real-opt all -j ${MAKE_JOBS} && \
cd $PETSC_DIR/src/binding/petsc4py && pip install .
# -----
# CGNS
# -----
RUN . /home/dafoamuser/dafoam/loadDAFoam.sh && \
echo '# CGNS' >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
echo "export CGNS_HOME=$DAFOAM_ROOT_PATH/packages/CGNS-${CGNS_VER}/opt-gfortran" >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
echo 'export PATH=$PATH:$CGNS_HOME/bin' >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
echo 'export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$CGNS_HOME/lib' >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
. $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
cd $DAFOAM_ROOT_PATH/packages && \
wget https://github.com/CGNS/CGNS/archive/v${CGNS_VER}.tar.gz -O cgns.tar.gz && \
tar -xvaf cgns.tar.gz && \
cd CGNS-${CGNS_VER} && mkdir -p build && cd build && \
cmake .. -DCGNS_ENABLE_FORTRAN=1 -DCMAKE_INSTALL_PREFIX=$CGNS_HOME \
-DCGNS_BUILD_CGNSTOOLS=0 -DCGNS_ENABLE_HDF5=OFF -DCGNS_ENABLE_64BIT=OFF \
-DCMAKE_C_FLAGS="-fPIC" -DCMAKE_Fortran_FLAGS="-fPIC" && \
make all install -j ${MAKE_JOBS}
# ------
# IPOPT
# ------
RUN if [ "${BUILD_IPOPT}" = "true" ]; then \
. /home/dafoamuser/dafoam/loadDAFoam.sh && \
echo '# Ipopt' >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
echo 'export IPOPT_DIR=$DAFOAM_ROOT_PATH/packages/Ipopt' >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
echo 'export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$IPOPT_DIR/lib' >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
. $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
cd $DAFOAM_ROOT_PATH/packages && \
git clone -b stable/3.13 https://github.com/coin-or/Ipopt.git && \
cd $IPOPT_DIR && \
git clone -b stable/2.1 https://github.com/coin-or-tools/ThirdParty-Mumps.git && \
cd ThirdParty-Mumps && ./get.Mumps && \
./configure --prefix=$IPOPT_DIR && make -j ${MAKE_JOBS} && make install && \
cd $IPOPT_DIR && mkdir -p build && cd build && \
../configure --prefix=${IPOPT_DIR} --disable-java --with-mumps \
--with-mumps-lflags="-L${IPOPT_DIR}/lib -lcoinmumps" \
--with-mumps-cflags="-I${IPOPT_DIR}/include/coin-or/mumps" && \
make -j ${MAKE_JOBS} && make install ; \
fi
# ----------------------------
# MACH-Aero pinned components
# ----------------------------
RUN . /home/dafoamuser/dafoam/loadDAFoam.sh && \
cd $DAFOAM_ROOT_PATH/repos && \
wget https://github.com/mdolab/baseclasses/archive/v${BASECLASSES_VER}.tar.gz -O baseclasses.tar.gz && \
tar -xf baseclasses.tar.gz && cd baseclasses-${BASECLASSES_VER} && pip install . && \
cd $DAFOAM_ROOT_PATH/repos && \
wget https://github.com/mdolab/pyspline/archive/v${PY_SPLINE_VER}.tar.gz -O pyspline.tar.gz && \
tar -xf pyspline.tar.gz && cd pyspline-${PY_SPLINE_VER} && \
cp config/defaults/config.LINUX_GFORTRAN.mk config/config.mk && \
make -j ${MAKE_JOBS} && pip install . && \
cd $DAFOAM_ROOT_PATH/repos && \
wget https://github.com/mdolab/pygeo/archive/v${PY_GEO_VER}.tar.gz -O pygeo.tar.gz && \
tar -xf pygeo.tar.gz && cd pygeo-${PY_GEO_VER} && pip install . && \
cd $DAFOAM_ROOT_PATH/repos && \
wget https://github.com/mdolab/multipoint/archive/v${MULTIPOINT_VER}.tar.gz -O multipoint.tar.gz && \
tar -xf multipoint.tar.gz && cd multipoint-${MULTIPOINT_VER} && pip install . && \
cd $DAFOAM_ROOT_PATH/repos && \
wget https://github.com/mdolab/cgnsutilities/archive/v${CGNS_UTILS_VER}.tar.gz -O cgnsutilities.tar.gz && \
tar -xf cgnsutilities.tar.gz && cd cgnsutilities-${CGNS_UTILS_VER} && \
cp config/defaults/config.LINUX_GFORTRAN.mk config/config.mk && \
make -j ${MAKE_JOBS} && pip install . && \
cd $DAFOAM_ROOT_PATH/repos && \
wget https://github.com/mdolab/pyhyp/archive/v${PY_HYP_VER}.tar.gz -O pyhyp.tar.gz && \
tar -xf pyhyp.tar.gz && cd pyhyp-${PY_HYP_VER} && \
cp -r config/defaults/config.LINUX_GFORTRAN_OPENMPI.mk config/config.mk && \
sed -i "s/mpifort/mpif90/g" config/config.mk && \
make -j ${MAKE_JOBS} && pip install . && \
cd $DAFOAM_ROOT_PATH/repos && \
wget https://github.com/mdolab/idwarp/archive/v${IDWARP_VER}.tar.gz -O idwarp.tar.gz && \
tar -xf idwarp.tar.gz && cd idwarp-${IDWARP_VER} && \
cp -r config/defaults/config.LINUX_GFORTRAN.mk config/config.mk && \
sed -i "s/mpifort/mpif90/g" config/config.mk && \
make -j ${MAKE_JOBS} && pip install . && \
cd $DAFOAM_ROOT_PATH/repos && \
wget https://github.com/mdolab/pyoptsparse/archive/v${PYOPTSPARSE_VER}.tar.gz -O pyoptsparse.tar.gz && \
tar -xf pyoptsparse.tar.gz && cd pyoptsparse-${PYOPTSPARSE_VER} && \
pip install .
# ---------------
# OpenFOAM v1812
# ---------------
RUN . /home/dafoamuser/dafoam/loadDAFoam.sh && \
cd $DAFOAM_ROOT_PATH/OpenFOAM && \
wget https://sourceforge.net/projects/openfoam/files/v1812/OpenFOAM-v1812.tgz/download -O OpenFOAM-v1812.tgz && \
wget https://sourceforge.net/projects/openfoam/files/v1812/ThirdParty-v1812.tgz/download -O ThirdParty-v1812.tgz && \
tar -xf OpenFOAM-v1812.tgz && tar -xf ThirdParty-v1812.tgz && \
cd $DAFOAM_ROOT_PATH/OpenFOAM/OpenFOAM-v1812 && \
wget https://github.com/DAFoam/files/releases/download/v1.0.0/OpenFOAM-v1812-patch-files.tar.gz && \
tar -xf OpenFOAM-v1812-patch-files.tar.gz && \
cd OpenFOAM-v1812-patch-files && ./runPatch.sh && \
cd .. && \
echo '# OpenFOAM-v1812' >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
echo 'source $DAFOAM_ROOT_PATH/OpenFOAM/OpenFOAM-v1812/etc/bashrc' >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
echo 'export LD_LIBRARY_PATH=$DAFOAM_ROOT_PATH/OpenFOAM/sharedLibs:$LD_LIBRARY_PATH' >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
echo 'export PATH=$DAFOAM_ROOT_PATH/OpenFOAM/sharedBins:$PATH' >> $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
. $DAFOAM_ROOT_PATH/loadDAFoam.sh && \
export WM_NCOMPPROCS=${MAKE_JOBS} && \
./Allwmake -j ${MAKE_JOBS} && \
simpleFoam -help >/dev/null
# ------------------------
# OpenFOAM Reverse-mode AD
# ------------------------
RUN . /home/dafoamuser/dafoam/loadDAFoam.sh && \
cd $DAFOAM_ROOT_PATH/OpenFOAM && \
wget https://github.com/DAFoam/OpenFOAM-v1812-AD/archive/v${OPENFOAM_AD_TAG}.tar.gz -O OpenFOAM-v1812-AD.tgz && \
tar -xf OpenFOAM-v1812-AD.tgz && mv OpenFOAM-v1812-AD-* OpenFOAM-v1812-ADR && \
cd $DAFOAM_ROOT_PATH/OpenFOAM/OpenFOAM-v1812-ADR && \
sed -i 's/WM_PROJECT_VERSION=v1812-AD/WM_PROJECT_VERSION=v1812-ADR/g' etc/bashrc && \
sed -i 's/export WM_CODI_AD_LIB_POSTFIX=ADF/export WM_CODI_AD_LIB_POSTFIX=ADR/g' etc/bashrc && \
. $DAFOAM_ROOT_PATH/loadDAFoam.sh && source etc/bashrc && \
export WM_NCOMPPROCS=${MAKE_JOBS} && \
./Allwmake -j ${MAKE_JOBS} && \
DASimpleFoamReverseAD -help >/dev/null && \
# link ADR libs into original OpenFOAM-v1812 (relative symlinks for portability)
cd $DAFOAM_ROOT_PATH/OpenFOAM/OpenFOAM-v1812/platforms/*/lib && \
ln -s ../../../../OpenFOAM-v1812-ADR/platforms/*/lib/*.so . && \
cd $DAFOAM_ROOT_PATH/OpenFOAM/OpenFOAM-v1812/platforms/*/lib/dummy && \
ln -s ../../../../../OpenFOAM-v1812-ADR/platforms/*/lib/dummy/*.so . && \
cd $DAFOAM_ROOT_PATH/OpenFOAM/OpenFOAM-v1812/platforms/*/lib/openmpi-system && \
ln -s ../../../../../OpenFOAM-v1812-ADR/platforms/*/lib/openmpi-system/*.so .
# ------------------------
# (Optional) OpenFOAM ADF
# ------------------------
RUN if [ "${BUILD_ADF}" = "true" ]; then \
. /home/dafoamuser/dafoam/loadDAFoam.sh && \
cd $DAFOAM_ROOT_PATH/OpenFOAM && \
wget https://github.com/DAFoam/OpenFOAM-v1812-AD/archive/v${OPENFOAM_AD_TAG}.tar.gz -O OpenFOAM-v1812-AD.tgz && \
tar -xf OpenFOAM-v1812-AD.tgz && mv OpenFOAM-v1812-AD-* OpenFOAM-v1812-ADF && \
cd $DAFOAM_ROOT_PATH/OpenFOAM/OpenFOAM-v1812-ADF && \
sed -i 's/WM_PROJECT_VERSION=v1812-AD/WM_PROJECT_VERSION=v1812-ADF/g' etc/bashrc && \
. $DAFOAM_ROOT_PATH/loadDAFoam.sh && source etc/bashrc && \
export WM_NCOMPPROCS=${MAKE_JOBS} && \
./Allwmake -j ${MAKE_JOBS} && \
cd $DAFOAM_ROOT_PATH/OpenFOAM/OpenFOAM-v1812/platforms/*/lib && \
ln -s ../../../../OpenFOAM-v1812-ADF/platforms/*/lib/*.so . && \
cd $DAFOAM_ROOT_PATH/OpenFOAM/OpenFOAM-v1812/platforms/*/lib/dummy && \
ln -s ../../../../../OpenFOAM-v1812-ADF/platforms/*/lib/dummy/*.so . && \
cd $DAFOAM_ROOT_PATH/OpenFOAM/OpenFOAM-v1812/platforms/*/lib/openmpi-system && \
ln -s ../../../../../OpenFOAM-v1812-ADF/platforms/*/lib/openmpi-system/*.so . ; \
fi
# -----
# pyOFM
# -----
RUN . /home/dafoamuser/dafoam/loadDAFoam.sh && \
cd $DAFOAM_ROOT_PATH/repos && \
wget https://github.com/mdolab/pyofm/archive/refs/tags/v${PYOFM_VER}.tar.gz -O pyofm.tar.gz && \
tar -xf pyofm.tar.gz && cd pyofm-* && make -j ${MAKE_JOBS} && pip install .
# -------
# DAFoam
# -------
RUN . /home/dafoamuser/dafoam/loadDAFoam.sh && \
cd $DAFOAM_ROOT_PATH/repos && \
wget https://github.com/mdolab/dafoam/archive/v${DAFOAM_VER}.tar.gz -O dafoam.tar.gz && \
tar -xf dafoam.tar.gz && cd dafoam-* && \
./Allmake && \
echo "" && echo "DAFoam build complete."
# -------
# OpenMDAO
# -------
RUN . /home/dafoamuser/dafoam/loadDAFoam.sh && \
pip install openmdao==${OPENMDAO_VER}
# -------
# MPhycs
# -------
RUN . /home/dafoamuser/dafoam/loadDAFoam.sh && \
cd $DAFOAM_ROOT_PATH/repos && \
wget https://github.com/OpenMDAO/mphys/archive/${MPHYS_HASH}.tar.gz -O mphys.tar.gz && \
tar -xvf mphys.tar.gz && mv mphys-* mphys && \
cd mphys && pip install .
# -------
# FUNTOFEM
# -------
RUN . /home/dafoamuser/dafoam/loadDAFoam.sh && \
cd $DAFOAM_ROOT_PATH/repos && \
wget https://github.com/smdogroup/funtofem/archive/refs/tags/v${FUNTOFEM_VER}.tar.gz -O funtofem.tar.gz && \
tar -xvf funtofem.tar.gz && mv funtofem-* funtofem && \
cd funtofem && cp Makefile.in.info Makefile.in && \
sed -i "s/F2F_DIR=.*/F2F_DIR=\$\{DAFOAM_ROOT_PATH\}\/repos\/funtofem/g" Makefile.in && \
make && pip install -e .
# --------
# FUNTOFEM
# --------
RUN . /home/dafoamuser/dafoam/loadDAFoam.sh && \
cd $DAFOAM_ROOT_PATH/repos && \
wget https://github.com/smdogroup/tacs/archive/refs/tags/v${TACS_VER}.tar.gz -O tacs.tar.gz && \
tar -xvf tacs.tar.gz && mv tacs-* tacs && \
cd tacs/extern && \
wget https://github.com/DAFoam/files/releases/download/TACS_Extern/TACS_extern.tar.gz && tar -xzf TACS_extern.tar.gz && \
rm -rf metis-4.0.3* && \
wget https://github.com/DAFoam/files/releases/download/TACS_Extern/metis-5.1.0.tar.gz && \
tar -czvf TACS_extern.tar.gz metis*.tar.gz UFconfig*.tar.gz AMD*.tar.gz &&\
tar -xzf metis*.tar.gz && \
cd metis-5.1.0 && make config prefix=$DAFOAM_ROOT_PATH/repos/tacs/extern/metis/ CFLAGS="-fPIC" && make install && \
cd ../../ && \
cp Makefile.in.info Makefile.in && \
ls && \
sed -i "s/TACS_DIR\ =.*/TACS_DIR=\$\{DAFOAM_ROOT_PATH\}\/repos\/tacs/g" Makefile.in && \
make && pip install -e . && \
cd extern/f5tovtk && make && cp f5tovtk $DAFOAM_ROOT_PATH/OpenFOAM/sharedBins
# Default env on container start
RUN echo 'echo "Loading DAFoam environment..."' >> /home/dafoamuser/.bashrc && \
echo '. $HOME/dafoam/loadDAFoam.sh' >> /home/dafoamuser/.bashrc
# Helpful default
WORKDIR /home/dafoamuser
CMD ["/bin/bash"]